TADM: Temporally-Aware Diffusion Model for Neurodegenerative Progression on Brain MRI

Abstract

Generating realistic images to accurately predict changes in the structure of brain MRI can be a crucial tool for clinicians. Such applications can help assess patients’ outcomes and analyze how diseases progress at the individual level. However, existing methods developed for this task present some limitations. Some approaches attempt to model the distribution of MRI scans directly by conditioning the model on patients’ ages, but they fail to explicitly capture the relationship between structural changes in the brain and time intervals, especially on age-unbalanced datasets. Other approaches simply rely on interpolation between scans, which limits their clinical application as they do not predict future MRIs. To address these challenges, we propose a Temporally-Aware Diffusion Model (TADM), which introduces a novel approach to accurately infer progression in brain MRIs. TADM learns the distribution of structural changes in terms of intensity differences between scans and combines the prediction of these changes with the initial baseline scans to generate future MRIs. Furthermore, during training, we propose to leverage a pre-trained Brain-Age Estimator (BAE) to refine the model’s training process, enhancing its ability to produce accurate MRIs that match the expected age gap between baseline and generated scans. Our assessment, conducted on 634 subjects from the OASIS-3 dataset, uses similarity metrics and region sizes computed by comparing predicted and real follow-up scans on 3 relevant brain regions. TADM achieves large improvements over existing approaches, with an average decrease of 24% in region size error and an improvement of 4% in similarity metrics. These evaluations demonstrate the improvement of our model in mimicking temporal brain neurodegenerative progression compared to existing methods. We believe that our approach will significantly benefit clinical applications, such as predicting patient outcomes or improving treatments for patients. Our code is publicly available at https://github.com/MattiaLitrico/TADM-Temporally-Aware-Diffusion-Model-for-Neurodegenerative-Progression-on-Brain-MRI.